Motif View

Internal ID 17688913
Source Database TransTermHP TERM 645
Feature Type terminator
Name
Rho-independent transcription terminator TERM 645
Sequence GCCCGCTCATTTGAGCGGGC
Look for more occurrences
Start 2070374
End 2070393
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGGAGCCATTCCA(5' tail) GCCCGCTC(5' stem) ATTT(loop) GAGCGGGC(3' stem) TTTTTTATGGGCTGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685