Motif View

Internal ID 17685255
Source Database TransTermHP TERM 768
Feature Type terminator
Name
Rho-independent transcription terminator TERM 768
Sequence GCCCCTGCCGGATCGTCCGACAGGGGC
Look for more occurrences
Start 3609176
End 3609202
Strand +
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGCCATAAGAAAA(5' tail) GCCCCTGCCGGA(5' stem) TCG(loop) TCCGACAGGGGC(3' stem) TTTTTGCTTTCTTGC(3' tail). Confidence: 100. opp_overlap 3609176 3609171

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685