Motif View

Internal ID 17685253
Source Database TransTermHP TERM 766
Feature Type terminator
Name
Rho-independent transcription terminator TERM 766
Sequence AAAAAGCCCCTGTCGGACGATCCGGCAGGGGCTTTTC
Look for more occurrences
Start 3609171
End 3609207
Strand -
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGGCACGCCATAA(5' tail) GAAAAGCCCCTGCCGGA(5' stem) TCG(loop) TCCGACAGGGGCTTTTT(3' stem) GCTTTCTTGCTGGCA(3' tail). Confidence: 100. opp_overlap 3609176, overlap 3609176

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685