Motif View

Internal ID 17685244
Source Database TransTermHP TERM 746
Feature Type terminator
Name
Rho-independent transcription terminator TERM 746
Sequence CAGAGCCGGCATGCCGGCTCTG
Look for more occurrences
Start 3521236
End 3521257
Strand -
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAATAGCGTTGAAA(5' tail) CAGAGCCGG(5' stem) CATG(loop) CCGGCTCTG(3' stem) CGGATCACCCCACCC(3' tail). Confidence: 90.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685