Motif View

Internal ID 17684549
Source Database TransTermHP TERM 1253
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1253
Sequence GGGCGCCTCCGGCGCCC
Look for more occurrences
Start 5235603
End 5235619
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa RP73, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCCCACATGAAAAA(5' tail) GGGCGCC(5' stem) GGA(loop) GGCGCCC(3' stem) TTTTTCATACCGTTG(3' tail). Confidence: 100. opp_overlap 5235603 5235591

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685