Motif View

Internal ID 17683190
Source Database TransTermHP TERM 670
Feature Type terminator
Name
Rho-independent transcription terminator TERM 670
Sequence GCCCGGCCAGCGAGCCGGGC
Look for more occurrences
Start 2705605
End 2705624
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCCGCAGCGAAAGA(5' tail) GCCCGGC(5' stem) CAGCGA(loop) GCCGGGC(3' stem) TTTTTCGTGGGCGCG(3' tail). Confidence: 100. opp_overlap 2705605 2705603, overlap 2705591 2705591

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685