| Internal ID | 17682476 | Source Database | TransTermHP TERM 1069 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1069
|
| Sequence |
CCCGCTCCCACAGGTTCGGTGCCGCCCTCAGGCCTTGCACGGGTCCTTGTGGGAGCGGG Look for more occurrences |
| Start | 5145795 |
| End | 5145853 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas putida H8234, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCCTTCGCGGGTAAA(5' tail) CCCGCTCCCACAAGGACCCGTGCAAGGCC(5' stem) TGA(loop) GGGCG-GCACCGAACCT-GTGGGAGCGGG(3' stem) TTTACCCGCGAAGAG(3' tail). Confidence: 93. gap 2, opp_overlap 5145795 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|