Motif View

Internal ID 17681376
Source Database TransTermHP TERM 896
Feature Type terminator
Name
Rho-independent transcription terminator TERM 896
Sequence GGGCCGGGAACTCCCGGCCC
Look for more occurrences
Start 3569392
End 3569411
Strand +
Genomic Context
Replicon Pseudomonas putida HB3267, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTGTTCGCTCGTC(5' tail) GGGCCGGG(5' stem) AACT(loop) CCCGGCCC(3' stem) TTTGCTGTGGTATAT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685