Motif View

Internal ID 17679549
Source Database TransTermHP TERM 32
Feature Type terminator
Name
Rho-independent transcription terminator TERM 32
Sequence CGCCGCTCTGGAATGCGCGCTACCCGCATTCCAGAGCGGCG
Look for more occurrences
Start 148875
End 148915
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCAGAAACGGGTTA(5' tail) CGCCGCTCTGGAATGCGCG(5' stem) CTA(loop) CCCGCATTCCAGAGCGGCG(3' stem) TCTCTGTGGTACATC(3' tail). Confidence: 100. opp_overlap 148869 148868

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685