Motif View

Internal ID 17679548
Source Database TransTermHP TERM 31
Feature Type terminator
Name
Rho-independent transcription terminator TERM 31
Sequence GATTTCGGCCGGGCCCGCCTGGCCGAAGTC
Look for more occurrences
Start 148813
End 148842
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCTGAGTGATCAGT(5' tail) GATTTCGGCCGGG(5' stem) CCCG(loop) CCTGGCCGAAGTC(3' stem) TTTTTTGCGAAGCAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685