Motif View

Internal ID 17675903
Source Database TransTermHP TERM 494
Feature Type terminator
Name
Rho-independent transcription terminator TERM 494
Sequence CCGCGGCCCCGGCCGCGG
Look for more occurrences
Start 2067441
End 2067458
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAGCCCCGCCAAGA(5' tail) CCGCGGC(5' stem) CCCG(loop) GCCGCGG(3' stem) TTTTTTTGTGCGGAG(3' tail). Confidence: 100. opp_overlap 2067441

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685