Motif View

Internal ID 17672358
Source Database TransTermHP TERM 713
Feature Type terminator
Name
Rho-independent transcription terminator TERM 713
Sequence CGATCTGTGGGAGCAAGCCTTGCTCCCACAGAGCC
Look for more occurrences
Start 3799466
End 3799500
Strand +
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGCTCTGTGGGGG(5' tail) CGATCTGTGGGAGCAA(5' stem) GCC(loop) TTGCTCCCACAGAGCC(3' stem) TTGTCCCCATAAATG(3' tail). Confidence: 100. overlap 3799452 3799467

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685