Motif View

Internal ID 17672162
Source Database TransTermHP TERM 437
Feature Type terminator
Name
Rho-independent transcription terminator TERM 437
Sequence CCTGTCAGCGCTGCGAAATCAGCGATGACGGG
Look for more occurrences
Start 1910998
End 1911029
Strand +
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGTTAATCCATGCA(5' tail) CCTGTCAGCGCTG(5' stem) CGAAAT(loop) CAGCGATGACGGG(3' stem) TTTTTGGCACTGTGT(3' tail). Confidence: 100. opp_overlap 1910962

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685