| Internal ID | 17671598 | Source Database | TransTermHP TERM 1065 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1065
|
| Sequence |
CAAACAAAAACGCCGCGACGAATCGCGGCGTTTTTGTTTG Look for more occurrences |
| Start | 4018212 |
| End | 4018251 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACACTCTGACCTGCG(5' tail) CAAACAAAAACGCCGCGA(5' stem) CGAA(loop) TCGCGGCGTTTTTGTTTG(3' stem) TGTGTGCCGAAGGCC(3' tail). Confidence: 100. opp_overlap 4018222, overlap 4018222 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|