| Internal ID | 17670798 | Source Database | TransTermHP TERM 1342 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1342
|
| Sequence |
CAGCGCACCGCAAAAGAGCCGACCTCAGGGTCGGCTTTTTTGTGGGCGATG Look for more occurrences |
| Start | 4318515 |
| End | 4318565 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fulva 12-X chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGACACCCGGGAAAC(5' tail) CATCGC-CCACAAAAAAGCCGACC(5' stem) CTGA(loop) GGTCGGCTCTTTTGCGGTGCGCTG(3' stem) ATGCTTACAACGCCT(3' tail). Confidence: 100. gap 1, opp_overlap 4318514 4318529 4318531, overlap 4318514 4318531 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|