Motif View

Internal ID 17670371
Source Database TransTermHP TERM 733
Feature Type terminator
Name
Rho-independent transcription terminator TERM 733
Sequence CAAAGGCCCCGAAATCGGGGCCTTTG
Look for more occurrences
Start 2414690
End 2414715
Strand -
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TATCCGCCGCAATGA(5' tail) CAAAGGCCCCG(5' stem) ATTT(loop) CGGGGCCTTTG(3' stem) TTTATCTGCAGGTTT(3' tail). Confidence: 100. opp_overlap 2414690 2414694, overlap 2414694

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685