Motif View

Internal ID 17666359
Source Database TransTermHP TERM 1061
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1061
Sequence CCCCCATCAGTGATGATGGGGG
Look for more occurrences
Start 3369117
End 3369138
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCACGCAAAGAAAAA(5' tail) CCCCCATCA(5' stem) TCAC(loop) TGATGGGGG(3' stem) TTTTCTTTTTCAGAC(3' tail). Confidence: 100. opp_overlap 3369117 3369112

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685