Motif View

Internal ID 17665961
Source Database TransTermHP TERM 530
Feature Type terminator
Name
Rho-independent transcription terminator TERM 530
Sequence GGTCAGAGCCTCTCGGCTCTGGCC
Look for more occurrences
Start 1538402
End 1538425
Strand +
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAAAATTTTTTATA(5' tail) GGTCAGAGCC(5' stem) TCTC(loop) GGCTCTGGCC(3' stem) TTGTTTGTTGTTCCC(3' tail). Confidence: 100. overlap 1538398

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685