Motif View

Internal ID 17665943
Source Database TransTermHP TERM 507
Feature Type terminator
Name
Rho-independent transcription terminator TERM 507
Sequence GCCCACCGTTTGGTGGGC
Look for more occurrences
Start 1451507
End 1451524
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGGCAACAAAAA(5' tail) GCCCACC(5' stem) AAAC(loop) GGTGGGC(3' stem) TTCTTGTATTCAGCA(3' tail). Confidence: 100. opp_overlap 1451501 1451507, overlap 1451501

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685