Motif View

Internal ID 17665517
Source Database TransTermHP TERM 921
Feature Type terminator
Name
Rho-independent transcription terminator TERM 921
Sequence CGCCGCCCAATGGGCGGCG
Look for more occurrences
Start 4269041
End 4269059
Strand -
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCCGGAACGAAAA(5' tail) CGCCGCCC(5' stem) ATT(loop) GGGCGGCG(3' stem) TTTTCGCATCTGCAG(3' tail). Confidence: 100. opp_overlap 4269041

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685