Motif View

Internal ID 17665414
Source Database TransTermHP TERM 753
Feature Type terminator
Name
Rho-independent transcription terminator TERM 753
Sequence GGCAGCCATCGGGCTGCC
Look for more occurrences
Start 3392243
End 3392260
Strand +
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTGCAAACAAAAA(5' tail) GGCAGCC(5' stem) ATCG(loop) GGCTGCC(3' stem) TTCTTTCTATAGACG(3' tail). Confidence: 95. opp_overlap 3392243

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685