| Internal ID | 17665342 | Source Database | TransTermHP TERM 624 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 624
|
| Sequence |
CCGACAGCGGCGGCGCCCGCCGCACCCGCGGCGCCGCGCGCGCCGCTGGAGG Look for more occurrences |
| Start | 2801974 |
| End | 2802025 |
| Strand | - |
| Genomic Context | Located within gene fliN |
| Replicon | Pseudomonas stutzeri A1501 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCGCACTGGCGAAAT(5' tail) CCTCCAGCGGCGCGCGCGGCGCCGC(5' stem) GGGT(loop) GCGGCGG-GCGC-CGCCGCTGTCGG(3' stem) CCCCTGGTTCAGCAG(3' tail). Confidence: 95. gap 2, opp_overlap 2801991, overlap 2801973 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|