Motif View

Internal ID 17665280
Source Database TransTermHP TERM 529
Feature Type terminator
Name
Rho-independent transcription terminator TERM 529
Sequence GGCCGTGGGGCTGATGGCCCCGCGGCC
Look for more occurrences
Start 2376714
End 2376740
Strand -
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGGGTGACACGAAAA(5' tail) GGCCGCGGGGCC(5' stem) ATC(loop) AGCCCCACGGCC(3' stem) TGAAAGAGGGCCCGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685