Motif View

Internal ID 17665088
Source Database TransTermHP TERM 204
Feature Type terminator
Name
Rho-independent transcription terminator TERM 204
Sequence GCCGGGCCTCGGAAGAGCCCGGC
Look for more occurrences
Start 908050
End 908072
Strand +
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGTAGAGCGCAGAA(5' tail) GCCGGGCCTC(5' stem) GGAA(loop) GAG-CCCGGC(3' stem) TTTTTTGCGGCTGGT(3' tail). Confidence: 100. gap 1, opp_overlap 908050

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685