Motif View

Internal ID 17665087
Source Database TransTermHP TERM 203
Feature Type terminator
Name
Rho-independent transcription terminator TERM 203
Sequence CCGGGCCTAGGCCCGG
Look for more occurrences
Start 906423
End 906438
Strand +
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCTGTATGAAGAA(5' tail) CCGGGC(5' stem) CTAG(loop) GCCCGG(3' stem) TTTTTTATTGTCTGA(3' tail). Confidence: 100. opp_overlap 906423, overlap 906416

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685