Motif View

Internal ID 17663275
Source Database TransTermHP TERM 1524
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1524
Sequence CAGGACGGCGACCTTCAGGTCGCCGTCCTG
Look for more occurrences
Start 6550064
End 6550093
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGCCTTTTTATCCA(5' tail) CAGGACGGCGACC(5' stem) TTCA(loop) GGTCGCCGTCCTG(3' stem) CTTTTTTGGCGCGGC(3' tail). Confidence: 100. opp_overlap 6550069, overlap 6550063

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685