Motif View

Internal ID 17662736
Source Database TransTermHP TERM 679
Feature Type terminator
Name
Rho-independent transcription terminator TERM 679
Sequence GCCCGGCCATCGAGCCGGGC
Look for more occurrences
Start 2773270
End 2773289
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCCGCAGCGGAAAA(5' tail) GCCCGGC(5' stem) CATCGA(loop) GCCGGGC(3' stem) TTTTTCATGGGCGCG(3' tail). Confidence: 100. opp_overlap 2773270

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685