Motif View

Internal ID 17662635
Source Database TransTermHP TERM 510
Feature Type terminator
Name
Rho-independent transcription terminator TERM 510
Sequence GGCCGCCAGCGGTTTCCCGCTGGCGGCC
Look for more occurrences
Start 2143345
End 2143372
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTATTCATGAAAAA(5' tail) GGCCGCCAGCGG(5' stem) GAAA(loop) CCGCTGGCGGCC(3' stem) TTTTTTCGTACTGTG(3' tail). Confidence: 100. opp_overlap 2143345

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685