Motif View

Internal ID 17662613
Source Database TransTermHP TERM 480
Feature Type terminator
Name
Rho-independent transcription terminator TERM 480
Sequence CGAGGCCCGCCCGGTTGCGGGCCTCG
Look for more occurrences
Start 2037908
End 2037933
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCCGATTCCTATCA(5' tail) CGAGGCCCGC(5' stem) CCGGTT(loop) GCGGGCCTCG(3' stem) TTTTTTCGGGAGGGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685