Motif View

Internal ID 17662547
Source Database TransTermHP TERM 374
Feature Type terminator
Name
Rho-independent transcription terminator TERM 374
Sequence GATCCCGGGACCGCGCCGGGCGCGTTCCCGGGAGC
Look for more occurrences
Start 1671862
End 1671896
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGACCCTGAGGTCG(5' tail) GATCCCGGGACCGCGC(5' stem) CGG(loop) GCGCGTTCCCGGGAGC(3' stem) TTCCTGGGGCAAAGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685