Motif View

Internal ID 17662352
Source Database TransTermHP TERM 38
Feature Type terminator
Name
Rho-independent transcription terminator TERM 38
Sequence GGCATGGTCGGTGACGACCATGCC
Look for more occurrences
Start 217683
End 217706
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAAAAAGAAAAAA(5' tail) GGCATGGTCG(5' stem) TCAC(loop) CGACCATGCC(3' stem) TGTCGTCGTCAGCCT(3' tail). Confidence: 100. opp_overlap 217683

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685