| Internal ID | 17661595 | Source Database | TransTermHP TERM 544 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 544
|
| Sequence |
GAAAAGCCCGGCCTAGGCCGGGTTTTTC Look for more occurrences |
| Start | 2085803 |
| End | 2085830 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TAGCCTTGTAGCTTG(5' tail) GAAAAGCCCGGC(5' stem) CTAG(loop) GCCGGGTTTTTC(3' stem) TTTGCCTGCGATTTG(3' tail). Confidence: 100. opp_overlap 2085808 2085809, overlap 2085809 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|