Motif View

Internal ID 17661011
Source Database TransTermHP TERM 1094
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1094
Sequence GGACTCTTCGGAGTCC
Look for more occurrences
Start 4771819
End 4771834
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCTCATAAAAAAA(5' tail) GGACTC(5' stem) CGAA(loop) GAGTCC(3' stem) TTTTTCACACGCCGC(3' tail). Confidence: 100. opp_overlap 4771819

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685