Motif View

Internal ID 17660990
Source Database TransTermHP TERM 1066
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1066
Sequence CCCGGCCTCGCGCCGGG
Look for more occurrences
Start 4645840
End 4645856
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCCTCATCGAAAAA(5' tail) CCCGGC(5' stem) CTCGC(loop) GCCGGG(3' stem) TTTTTTATACTCCAG(3' tail). Confidence: 100. opp_overlap 4645840

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685