Motif View

Internal ID 17660695
Source Database TransTermHP TERM 568
Feature Type terminator
Name
Rho-independent transcription terminator TERM 568
Sequence GGCGCCTCGAAGGGCGCC
Look for more occurrences
Start 2338746
End 2338763
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGACTCATAAAAAA(5' tail) GGCGCCT(5' stem) CGAA(loop) GGGCGCC(3' stem) TTTTTTGTTGTTGCC(3' tail). Confidence: 100. opp_overlap 2338746

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685