Motif View

Internal ID 17659993
Source Database TransTermHP TERM 970
Feature Type terminator
Name
Rho-independent transcription terminator TERM 970
Sequence GGACGACTTCGGTCGTCC
Look for more occurrences
Start 4323954
End 4323971
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCATAAACAAAAAA(5' tail) GGACGAC(5' stem) CGAA(loop) GTCGTCC(3' stem) TTTTTTTGGTCAAGC(3' tail). Confidence: 100. opp_overlap 4323954

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685