Internal ID | 17657571 |
Source Database | TransTermHP TERM 1538 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1538
|
Sequence |
CCGCTCGGGACCGCTGCGAATGCCCGGCGCTGCCGGGCATTCGCGTTTATCCTCCGCGC Look for more occurrences |
Start | 6326261 |
End | 6326319 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GAACAGACGGAAAAA(5' tail) GCGCGGAGGATAAACGCGAATGCCCGGC(5' stem) AGC(loop) GCCGGGCATTCGCAGCGGTCCCGAGCGG(3' stem) GCCTTGGGGGTCAGC(3' tail). Confidence: 100. overlap 6326275 6326276 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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