Motif View

Internal ID 17657546
Source Database TransTermHP TERM 1498
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1498
Sequence GGCCCGCCACCCGTGAGGGAGTGGCGGGCC
Look for more occurrences
Start 6223202
End 6223231
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGCCATAGCACAA(5' tail) GGCCCGCCACTCC(5' stem) CTCAC(loop) GG-GTGGCGGGCC(3' stem) TTGGGATGACGCGAA(3' tail). Confidence: 93. gap 1, overlap 6223184 6223199

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685