Motif View

Internal ID 17657085
Source Database TransTermHP TERM 815
Feature Type terminator
Name
Rho-independent transcription terminator TERM 815
Sequence GGCGCCCACGGGCGCC
Look for more occurrences
Start 3622443
End 3622458
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTCCATACGACGAAA(5' tail) GGCGCC(5' stem) CACG(loop) GGCGCC(3' stem) TTTTTCGTTTCCTCT(3' tail). Confidence: 100. opp_overlap 3622443, overlap 3622435

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685