Motif View

Internal ID 17656960
Source Database TransTermHP TERM 597
Feature Type terminator
Name
Rho-independent transcription terminator TERM 597
Sequence GGCCACTCCACGAGTGGCC
Look for more occurrences
Start 2395948
End 2395966
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCGAGACGAAAAA(5' tail) GGCCACTC(5' stem) GTG(loop) GAGTGGCC(3' stem) TTCTCTGGTGTAGCG(3' tail). Confidence: 100. opp_overlap 2395948

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685