| Internal ID | 17656842 |
| Source Database | TransTermHP TERM 422 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 422
|
| Sequence |
AATGGGCAAGCGCCGCGAAAGTTCCAACTTTCGCGGCGCTTGCCGGTA Look for more occurrences |
| Start | 1818042 |
| End | 1818089 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGACCTGACGTAAGC(5' tail) AATGGGCAAGCGCCGCGAAAGT(5' stem) TCCA(loop) ACTTTCGCGGCGCTTGCCGGTA(3' stem) TTTCCAGTGAATTGT(3' tail). Confidence: 100. opp_overlap 1818044 1818045, overlap 1818044 1818045 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|