Motif View

Internal ID 17656820
Source Database TransTermHP TERM 387
Feature Type terminator
Name
Rho-independent transcription terminator TERM 387
Sequence GCCCGCTTCGGCGGGC
Look for more occurrences
Start 1627491
End 1627506
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCACTGGTGTTCAG(5' tail) GCCCGC(5' stem) TTCG(loop) GCGGGC(3' stem) TTTTCATGGCCGCCG(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685