Motif View

Internal ID 17656783
Source Database TransTermHP TERM 332
Feature Type terminator
Name
Rho-independent transcription terminator TERM 332
Sequence CACCGACGGCCCGCTTGCGGGCCGTCGGCG
Look for more occurrences
Start 1431086
End 1431115
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCGCAGCGCTGTAG(5' tail) CACCGACGGCCCG(5' stem) CTTG(loop) CGGGCCGTCGGCG(3' stem) TTTCCGGGGCGGAGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685