Motif View

Internal ID 17656739
Source Database TransTermHP TERM 256
Feature Type terminator
Name
Rho-independent transcription terminator TERM 256
Sequence GGCGAAGCCATCCGGCTTCGCC
Look for more occurrences
Start 1202968
End 1202989
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGAAACGAAAAA(5' tail) GGCGAAGCC(5' stem) GGAT(loop) GGCTTCGCC(3' stem) TTTTTTCTCCACGCC(3' tail). Confidence: 100. opp_overlap 1202968

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685