Motif View

Internal ID 17656513
Source Database TransTermHP TERM 1422
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1422
Sequence CCCCGCCCGCGTGGCGGGG
Look for more occurrences
Start 5830277
End 5830295
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCGGAAACGAAAA(5' tail) CCCCGCC(5' stem) ACGCG(loop) GGCGGGG(3' stem) TTGGCGAAACGCCGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685