| Internal ID | 17656350 | Source Database | TransTermHP TERM 1179 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1179
|
| Sequence |
AACGAAAAAGCCCACCTTCGCAGGTGGGCTTTTTCGTC Look for more occurrences |
| Start | 5086881 |
| End | 5086918 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAATAAGGGTACAGA(5' tail) AACGAAAAAGCCCACCT(5' stem) TCGC(loop) AGGTGGGCTTTTTCGTC(3' stem) TTGAATATGGTGGGT(3' tail). Confidence: 95. opp_overlap 5086890, overlap 5086890 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|