Motif View

Internal ID 17656282
Source Database TransTermHP TERM 1091
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1091
Sequence CGCCTGCGGACAAGCAGGCG
Look for more occurrences
Start 4816535
End 4816554
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGGTTGAAAAAA(5' tail) CGCCTGC(5' stem) TTGTCC(loop) GCAGGCG(3' stem) TTTTTTTGCCGCGCT(3' tail). Confidence: 100. opp_overlap 4816535

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685