Motif View

Internal ID 17656091
Source Database TransTermHP TERM 764
Feature Type terminator
Name
Rho-independent transcription terminator TERM 764
Sequence GGGCCGATTCAACCGGGTGAATCGGCCC
Look for more occurrences
Start 3421636
End 3421663
Strand +
Genomic Context Located within gene [PA3057]
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGAAGCAAAAAAAG(5' tail) GGGCCGATTCA(5' stem) ACCGGG(loop) TGAATCGGCCC(3' stem) TTTCTGAAAGACCCT(3' tail). Confidence: 91. opp_overlap 3421635 3421636

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685