Motif View

Internal ID 17656090
Source Database TransTermHP TERM 763
Feature Type terminator
Name
Rho-independent transcription terminator TERM 763
Sequence AGGGCCGATTCACCCGGTTGAATCGGCCCC
Look for more occurrences
Start 3421635
End 3421664
Strand -
Genomic Context Located within gene [PA3057]
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGGAAGCAAAAAAA(5' tail) GGGGCCGATTCA(5' stem) ACCGGG(loop) TGAATCGGCCCT(3' stem) TTCTGAAAGACCCTG(3' tail). Confidence: 100. opp_overlap 3421636, overlap 3421636

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685