Motif View

Internal ID 17656074
Source Database TransTermHP TERM 742
Feature Type terminator
Name
Rho-independent transcription terminator TERM 742
Sequence GGCCGCTATTGCGGCC
Look for more occurrences
Start 3364969
End 3364984
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAATAGCGAAAAA(5' tail) GGCCGC(5' stem) AATA(loop) GCGGCC(3' stem) TTTTTTTCGTTGCGA(3' tail). Confidence: 100. opp_overlap 3364969

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685